Alexandre Bonvin bio photo

Computational Structural Biology group focusing on dissecting, understanding and predicting biomolecular interactions at the molecular level.

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High Ambiguity Driven biomolecular DOCKing

based on biochemical and/or biophysical information.

Structure + Binformatic/Biophysical Data => Complex

Version: 2.2 (March, 2015) (changes)

Authors: Alexandre Bonvin and members of the computational structural biology group, Utrecht University


    Bijvoet Center for Biomolecular Research
    Padualaan 8, 3584 CH Utrecht, the Netherlands
    Phone: +31-30-2533859
    Fax: +31-30-2537623

HADDOCK is one of the flagship software in the EU H2020 BioExcel Center of Excellence for Biomolecular Research BioExcel

HADDOCK online (setup your run):

HADDOCK manual:

HADDOCK webserver:

HADDOCK grid-enabled webserver:

Getting the software: license form

Questions about HADDOCK or looking for support? Ask BioExcel

A short introduction: View the BioExcel CoE webinar about HADDOCK

  • The old HADDOCK2.1 page is still available here.
  • The 2.1 version of the HADDOCK server is still available here.
  • The 2.1 version of the grid-enabled HADDOCK server is still available here.


When using HADDOCK cite:

For additional citations when using specific modules see also our publication page.


HADDOCK is derived from ARIA scripts by Michael Nilges and Jens Linge.

The ongoing development of HADDOCK is the result of a team effort and in particular contributions from Cyril Dominguez, Aalt-Jan van Dijk, Sjoerd de Vries, Marc van Dijk, Ezgi Karaca, Panagiotis Kastritis, Adrien Melquiond, Mikael Trellet, Gydo van Zundert and Joao Rodrigues are acknowledged.

... more than fish or software..., discover the "capitaine" ... Haddock
Copyright © Hergé Moulinsart 2003