visualization
Renderer = Literal['html', 'notebook', 'streamlit']
module-attribute
Which molstar renderer to use for visualization.
show_fitted_models_and_density(fitted_models, density, renderer='notebook')
Visualizes fitted models and their associated density map with molstar.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
fitted_models
|
DataFrame
|
The fitted models retrieved with load_fitted_models. |
required |
density
|
Path
|
Path to the density map file (e.g., CCP4 format). |
required |
renderer
|
Renderer
|
Renderer to use for visualization. |
'notebook'
|
show_structure_and_density(structure, density, renderer='notebook')
Visualizes a structure and its associated density map with molstar.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
structure
|
Path | str
|
Path to the structure file (PDB format). |
required |
density
|
Path
|
Path to the density map file (e.g., CCP4 format). |
required |
renderer
|
Renderer
|
Renderer to use for visualization. |
'notebook'
|