1. 1. Home
  2. 2. Installation
  3. 3. Usage
    1. 3.1. tbl
      1. 3.1.1. Active/Passive
      2. 3.1.2. Configuration file
    2. 3.2. ti
    3. 3.3. restraint
    4. 3.4. interface
    5. 3.5. z
    6. 3.6. unambig-ti
  4. 4. Development

haddock-restraints

Usage

haddock-restraints is a command-line tool that is organized with subcommands. Each subcommand has its own set of options and arguments. The main subcommands are:

  • tbl: Generate .tbl file from a configuration file

  • ti: Generate true-interface restraints from a PDB file

  • restraint: Generate unambiguous restraints to keep molecules together during docking

  • interface: List residues in the interface

  • z: Generate restraints to keep the molecule aligned to the Z-axis

  • unambig-ti: Generate unambiguous true-interface restraints